Preface |
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vii | |
I. MICROSCOPIC TECHNIQUES |
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1 | (22) |
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Use and care of the microscope |
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7 | (4) |
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Using the bright field light microscope |
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7 | (3) |
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Using the oil immersion lens directly |
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10 | (1) |
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Measuring cells using the microscope |
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11 | (2) |
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Observation of living microorganisms |
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13 | (3) |
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14 | (1) |
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Making a hanging drop mount |
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15 | (1) |
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Specialized light microscopes |
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16 | (7) |
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Dark field light microscope |
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16 | (2) |
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Phase contrast light microscope |
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18 | (2) |
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20 | (3) |
II. CULTIVATION OF MICROORGANISMS |
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23 | (16) |
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Preparation of culture media |
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24 | (4) |
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Procedure for preparing a glucose minimal salts broth (a chemically-defined medium) |
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25 | (1) |
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Procedure for preparing a nutrient broth or agar (a chemically-complex medium) |
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26 | (1) |
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Procedure for autoclaving the medium |
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26 | (1) |
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Procedure for using the culture medium |
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26 | (1) |
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Procedure for preparing agar plates |
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27 | (1) |
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Microorganisms in the laboratory environment |
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28 | (2) |
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30 | (9) |
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Procedure for making a streak plate |
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30 | (3) |
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Procedure for subculturing a pure culture into broth |
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33 | (1) |
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Procedure for subculturing a pure culture onto an agar slant |
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33 | (2) |
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Procedure for aseptic transfers using pipets |
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35 | (2) |
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Selective and differential media |
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37 | (2) |
III. STAINING |
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39 | (24) |
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Positive and negative staining |
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41 | (3) |
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Procedure for positive staining |
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42 | (1) |
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Procedure for negative staining |
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43 | (1) |
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44 | (5) |
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44 | (3) |
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47 | (2) |
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49 | (8) |
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49 | (2) |
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51 | (3) |
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54 | (3) |
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57 | (2) |
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Metachromatic (volutin) granules |
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57 | (1) |
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Poly-β-hydroxybutyric acid (PHB) |
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58 | (1) |
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59 | (1) |
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59 | (4) |
IV. ENUMERATION OF MICROORGANISMS |
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63 | (10) |
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Direct microscopic counts with a hemocytometer |
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64 | (2) |
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66 | (3) |
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Procedure for the pour plate method |
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67 | (1) |
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Procedure for the spread plate method |
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67 | (2) |
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Optical density measurements |
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69 | (4) |
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Procedure for determining population size using the pour plate method |
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70 | (1) |
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Procedure for determining the OD of the culture |
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70 | (3) |
V. ENVIRONMENTAL FACTORS AFFECTING GROWTH |
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73 | (14) |
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Effect of temperature on microbial growth |
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75 | (1) |
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Effect of pH on microbial growth |
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76 | (1) |
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Effect of osmotic pressure on microbial growth |
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77 | (2) |
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Effect of NaCl on microorganisms |
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79 | (1) |
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Effect of sucrose on micro-organisms |
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79 | (1) |
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Effect of oxygen on microbial growth |
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79 | (6) |
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Growing organisms in an anaerobic gaspak jar |
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82 | (1) |
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Growing organisms in agar shake-cultures |
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83 | (1) |
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Growing organisms in a pyrogallic acid NaOH system |
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83 | (1) |
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Growing organisms in a candle jar |
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84 | (1) |
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Effect of light on microbial growth |
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85 | (2) |
VI. CONTROL OF MICROBIAL GROWTH |
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87 | (10) |
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Physical methods of control |
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90 | (3) |
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The effectiveness of hand washing |
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90 | (1) |
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The effectiveness of heating |
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90 | (1) |
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The effectiveness of filtering |
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91 | (1) |
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The effectiveness of ultraviolet light |
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92 | (1) |
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Chemical methods of control |
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93 | (4) |
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Studying the factors that make an antimicrobial effective |
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93 | (1) |
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Determining the phenol coefficient |
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94 | (1) |
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Testing the bactericidal or bacteriostatic effect of antibiotics and drugs |
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95 | (1) |
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Determining the selective toxicity of antibiotics and drugs |
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95 | (2) |
VII. METABOLIC ACTIVITIES OF MICROORGANISMS |
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97 | (26) |
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Hydrolysis of large extracellular molecules |
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98 | (6) |
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Hydrolysis of polysaccharides |
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98 | (2) |
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100 | (1) |
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Hydrolysis of nucleic acids (DNA) |
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101 | (1) |
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102 | (2) |
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Fermentation of carbohydrates |
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104 | (3) |
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Fermentation of glucose, lactose, sucrose, maltose, and mannitol |
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104 | (2) |
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106 | (1) |
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106 | (1) |
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Respiration of carbohydrates |
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107 | (4) |
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108 | (1) |
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109 | (1) |
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109 | (2) |
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Utilization of amino acids |
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111 | (4) |
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111 | (1) |
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Hydrogen sulfide production |
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111 | (1) |
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Lysine decarboxylase test |
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112 | (3) |
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Phenylalanine deamination |
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115 | (1) |
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Utilization of citrate, gelatin, and urea |
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115 | (3) |
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116 | (1) |
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116 | (1) |
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117 | (1) |
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Identification of an unknown bacterium |
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118 | (5) |
VIII. SURVEY OF EUKARYOTES AND CYANOBACTERIA |
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123 | (16) |
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124 | (7) |
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124 | (2) |
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126 | (3) |
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Sexual reproduction in Rhizopus |
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129 | (2) |
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131 | (3) |
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132 | (1) |
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Examination of pond water for protozoa |
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132 | (1) |
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Examination of prepared slides |
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133 | (1) |
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134 | (5) |
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Examination of algal cultures |
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135 | (2) |
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Examination of pond water for algae |
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137 | (2) |
IX. THE VIRUSES |
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139 | (14) |
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143 | (1) |
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144 | (1) |
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145 | (1) |
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146 | (4) |
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Phage typing of Staphylococcus aureus |
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150 | (3) |
X. GENETICS OF MICROORGANISMS |
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153 | (22) |
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Phenotypic and genotypic variation |
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154 | (5) |
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Illustrating phenotypic variation |
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154 | (1) |
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Isolating a mutant and illustrating genotypic variation |
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155 | (1) |
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Isolating streptomycin-resistant mutants (gradient plate technique) |
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155 | (2) |
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157 | (2) |
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159 | (3) |
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162 | (1) |
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163 | (3) |
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166 | (5) |
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Mapping mutations and genes with F' and F- mutants |
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166 | (3) |
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Mapping genes by interrupting matings between Hfr and F- mutants |
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169 | (2) |
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171 | (4) |
XI. MICROBIAL ECOLOGY |
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175 | (20) |
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Population dynamics (growth curve) |
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176 | (1) |
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177 | (3) |
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177 | (2) |
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179 | (1) |
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180 | (1) |
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Microbial populations in soil |
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180 | (4) |
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Isolating microbial populations |
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181 | (1) |
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Isolation of an endospore former |
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182 | (1) |
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Isolation of an antibiotic producer |
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183 | (1) |
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184 | (4) |
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185 | (1) |
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185 | (1) |
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186 | (1) |
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187 | (1) |
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188 | (4) |
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188 | (1) |
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Examination of photosynthetic sulfur bacteria |
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189 | (1) |
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Isolation of Thiobacillus |
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190 | (1) |
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Isolation of sulfate reducers |
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191 | (1) |
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192 | (1) |
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193 | (2) |
XII. WATER SANITARY ANALYSIS |
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195 | (10) |
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Most probable number method for coliform analysis |
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196 | (2) |
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Membrane filter method for coliform analysis |
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198 | (2) |
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Noncoliform indicators of recreational water quality |
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200 | (2) |
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Isolation of Actinomyces from water and wastewater treatment plants |
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202 | (3) |
XIII. FOOD MICROBIOLOGY |
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205 | (18) |
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206 | (5) |
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Enumeration of food spoilage organisms |
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206 | (1) |
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Enumeration of proteolytic bacteria in food |
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207 | (1) |
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Enumeration of lipolytic bacteria |
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208 | (1) |
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Enumeration of molds and yeasts from fruit |
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208 | (3) |
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211 | (1) |
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Evaluating the sanitary quality of foods |
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212 | (4) |
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Coliform analysis of foods |
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213 | (1) |
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Fecal streptococcal analysis of foods |
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214 | (2) |
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Examination of eating utensils and equipment |
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216 | (2) |
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Microbes and food production |
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218 | (5) |
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218 | (3) |
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221 | (1) |
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Microorganisms in sourdough production |
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221 | (2) |
XIV. DAIRY MICROBIOLOGY |
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223 | (18) |
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Analysis of the sanitary quality of milk and dairy products |
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224 | (8) |
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224 | (1) |
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224 | (1) |
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Direct microscopic counts |
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225 | (7) |
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232 | (3) |
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232 | (1) |
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232 | (1) |
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Direct microscopic somatic cell count |
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233 | (1) |
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Cultural methods for mastitis milk |
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233 | (2) |
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235 | (2) |
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Microbes and the production of dairy foods |
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237 | (4) |
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238 | (1) |
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Microorganisms and cheese production |
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238 | (3) |
XV. AGRICULTURAL MICROBIOLOGY |
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241 | (8) |
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242 | (4) |
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242 | (1) |
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242 | (2) |
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244 | (1) |
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245 | (1) |
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246 | (1) |
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246 | (1) |
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Examination of rumen fluid |
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247 | (2) |
XVI. MEDICAL MICROBIOLOGY |
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249 | |
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250 | |
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The oral cavity and cariogenic bacteria |
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250 | |
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251 | |
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251 | |
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Antibiotic sensitivity and the Kirby-Bauer procedure |
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252 | |
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255 | |
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257 | |
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Bacterial agglutination test |
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257 | |
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258 | |
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262 | |
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The rapid plasma reagin (RPR) test for syphilis |
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264 | |
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Rapid multitest procedures for the identification of Enterobacteriaceae |
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266 | |
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266 | |
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268 | |
APPENDICES |
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A. How to calculate dilutions |
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A1 | |
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B. Ranges and color changes of common pH indicators |
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B1 | |
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C. Organisms used in the laboratory manual |
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C1 | |
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D1 | |
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E. Stains, indicators, and reagents |
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E1 | |
Index |
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I1 | |